STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001443525_00114Unannotated protein. (204 aa)    
Predicted Functional Partners:
GCA_001443525_00472
Unannotated protein.
 
  
 0.885
GCA_001443525_01715
Unannotated protein.
  
 
 0.874
GCA_001443525_00196
Unannotated protein.
    
 0.863
GCA_001443525_00878
Unannotated protein.
    
 0.691
GCA_001443525_01051
Unannotated protein.
    
 0.660
GCA_001443525_01569
Unannotated protein.
  
 
  0.652
GCA_001443525_00881
Unannotated protein.
    
 0.644
GCA_001443525_02450
Unannotated protein.
    
 0.644
GCA_001443525_02766
Unannotated protein.
    
 0.644
GCA_001443525_03249
Unannotated protein.
    
  0.629
Your Current Organism:
Desulfobacteraceae bacterium RAAP1
NCBI taxonomy Id: 1735114
Other names: D. bacterium RAAP-1, Desulfobacteraceae bacterium RAAP-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.