STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001443525_00359Unannotated protein. (223 aa)    
Predicted Functional Partners:
GCA_001443525_01477
Unannotated protein.
 
 
 0.981
GCA_001443525_02703
Unannotated protein.
   
 
 0.977
GCA_001443525_03417
Unannotated protein.
   
 
 0.956
GCA_001443525_00360
Unannotated protein.
 
   
 0.911
GCA_001443525_00357
Unannotated protein.
 
     0.899
GCA_001443525_02707
Unannotated protein.
 
      0.890
GCA_001443525_00999
Unannotated protein.
  
 
 0.875
GCA_001443525_02701
Unannotated protein.
  
 
 0.866
GCA_001443525_00775
Unannotated protein.
   
  
 0.839
GCA_001443525_00131
Unannotated protein.
  
  
 0.829
Your Current Organism:
Desulfobacteraceae bacterium RAAP1
NCBI taxonomy Id: 1735114
Other names: D. bacterium RAAP-1, Desulfobacteraceae bacterium RAAP-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.