STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001443525_01742Unannotated protein. (225 aa)    
Predicted Functional Partners:
GCA_001443525_01743
Unannotated protein.
 0.998
GCA_001443525_00585
Unannotated protein.
 0.997
GCA_001443525_01741
Unannotated protein.
 
 
0.993
GCA_001443525_01744
Unannotated protein.
 
 0.990
GCA_001443525_02421
Unannotated protein.
  
 0.985
GCA_001443525_00070
Unannotated protein.
 0.979
GCA_001443525_03439
Unannotated protein.
 
 
 0.932
GCA_001443525_00068
Unannotated protein.
 
 
 
0.926
GCA_001443525_02288
Unannotated protein.
     
 0.926
GCA_001443525_00108
Unannotated protein.
     
 0.925
Your Current Organism:
Desulfobacteraceae bacterium RAAP1
NCBI taxonomy Id: 1735114
Other names: D. bacterium RAAP-1, Desulfobacteraceae bacterium RAAP-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.