STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001443525_03587Unannotated protein. (291 aa)    
Predicted Functional Partners:
GCA_001443525_03599
Unannotated protein.
   
  0.856
GCA_001443525_02310
Unannotated protein.
 
 
 0.814
GCA_001443525_02886
Unannotated protein.
  
 
  0.807
GCA_001443525_02434
Unannotated protein.
 
   
 0.778
GCA_001443525_02306
Unannotated protein.
  
     0.775
GCA_001443525_01398
Unannotated protein.
  
  
  0.768
GCA_001443525_01793
Unannotated protein.
 
  
  0.737
GCA_001443525_00790
Unannotated protein.
 
 
 0.701
GCA_001443525_03320
Unannotated protein.
 
 
 0.676
GCA_001443525_03586
Unannotated protein.
    
 0.661
Your Current Organism:
Desulfobacteraceae bacterium RAAP1
NCBI taxonomy Id: 1735114
Other names: D. bacterium RAAP-1, Desulfobacteraceae bacterium RAAP-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.