STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALM10584.1Multi-sensor signal transduction histidine kinase. (358 aa)    
Predicted Functional Partners:
ALM11564.1
Response regulator.
 0.971
ALM10770.1
Two component transcriptional regulator, winged helix family.
 
 0.960
ALM11497.1
Winged helix family two component transcriptional regulator.
 
 0.956
ALM10784.1
OmpR family two-component response regulator.
 
 
 
 0.771
ALM11565.1
Integral membrane sensor signal transduction histidine kinase.
0.744
nadK
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
    
  0.684
ALM10687.1
NarL family signal transduction histidine kinase.
 
0.644
ALM10585.1
Hypothetical protein.
       0.631
ALM10783.1
Two component, sigma54 specific, transcriptional regulator, Fis family.
 
 
 
 0.511
ALM11121.1
nifR3 family TIM-barrel protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.
 
 
  
 0.497
Your Current Organism:
Peribacter riflensis
NCBI taxonomy Id: 1735162
Other names: C. Peribacter riflensis, Candidatus Peregrinibacteria bacterium RIFOXYA2_FULL_PER-ii_58_14, Candidatus Peregrinibacteria bacterium RIFOXYB2_FULL_PER-ii_58_17, Candidatus Peregrinibacteria bacterium RIFOXYC2_FULL_PER-ii_58_32, Candidatus Peregrinibacteria bacterium RIFOXYD1_FULL_PER-ii_59_16, Candidatus Peregrinibacteria bacterium RIFOXYD2_FULL_PER-ii_51_23, Candidatus Peribacter riflensis, Candidatus Peribacteria bacterium RIFOXYA2_FULL_PER-ii_58_14, Candidatus Peribacteria bacterium RIFOXYB2_FULL_PER-ii_58_17, Candidatus Peribacteria bacterium RIFOXYC2_FULL_PER-ii_58_32, Candidatus Peribacteria bacterium RIFOXYD1_FULL_PER-ii_59_16, Candidatus Peribacteria bacterium RIFOXYD2_FULL_PER-ii_51_23
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.