STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALM10791.1CHRD domain-containing protein. (627 aa)    
Predicted Functional Partners:
ALM11025.1
Hypothetical protein.
  
     0.774
ALM11012.1
Ig-like domain-containing protein,putative S-layer protein.
  
     0.772
ALM10848.1
S-layer protein.
  
     0.770
ALM10633.1
N-acetylmuramoyl-L-alanine amidase.
  
     0.766
ALM10653.1
Hypothetical protein.
  
     0.763
ALM10650.1
Putative lipoprotein.
 
     0.762
ALM10894.1
Hypothetical protein.
  
     0.758
ALM10632.1
Putative S-layer protein.
  
     0.752
ALM11037.1
Polysaccharide pyruvyl transferase CsaB.
  
    0.752
ALM10662.1
Amidase.
  
     0.750
Your Current Organism:
Peribacter riflensis
NCBI taxonomy Id: 1735162
Other names: C. Peribacter riflensis, Candidatus Peregrinibacteria bacterium RIFOXYA2_FULL_PER-ii_58_14, Candidatus Peregrinibacteria bacterium RIFOXYB2_FULL_PER-ii_58_17, Candidatus Peregrinibacteria bacterium RIFOXYC2_FULL_PER-ii_58_32, Candidatus Peregrinibacteria bacterium RIFOXYD1_FULL_PER-ii_59_16, Candidatus Peregrinibacteria bacterium RIFOXYD2_FULL_PER-ii_51_23, Candidatus Peribacter riflensis, Candidatus Peribacteria bacterium RIFOXYA2_FULL_PER-ii_58_14, Candidatus Peribacteria bacterium RIFOXYB2_FULL_PER-ii_58_17, Candidatus Peribacteria bacterium RIFOXYC2_FULL_PER-ii_58_32, Candidatus Peribacteria bacterium RIFOXYD1_FULL_PER-ii_59_16, Candidatus Peribacteria bacterium RIFOXYD2_FULL_PER-ii_51_23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.