STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQM48423.1Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)    
Predicted Functional Partners:
KQM48424.1
Tat pathway signal sequence domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     0.990
KQM48143.1
Rhamnogalacturonan acetylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.906
KQM48422.1
Oligogalacturonate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.880
KQM48144.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.818
KQM48418.1
Glycoside hydrolase family 43; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.795
KQM48420.1
exo-poly-alpha-D-galacturonosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.763
KQM48421.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.747
KQM56216.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.732
KQM51831.1
Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.701
KQM53944.1
Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.699
Your Current Organism:
Sphingomonas sp. Leaf208
NCBI taxonomy Id: 1735679
Other names: S. sp. Leaf208
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.