STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQM63734.1Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology. (354 aa)    
Predicted Functional Partners:
KQM63732.1
Pilus assembly protein CpaE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.995
KQM63733.1
Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.
 
  
 0.995
KQM63731.1
Pilus assembly protein TadB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.993
KQM63730.1
Pilus assembly protein TadC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.990
KQM63735.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
KQM63820.1
Pilus assembly protein CpaD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.952
KQM65173.1
Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.922
KQM63209.1
Flagellar protein FlaI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.900
KQM64998.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.893
KQM64999.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.891
Your Current Organism:
Sphingomonas sp. Leaf17
NCBI taxonomy Id: 1735683
Other names: S. sp. Leaf17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.