STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQM76884.1Tat (twin-arginine translocation) pathway signal sequence containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (242 aa)    
Predicted Functional Partners:
KQM76883.1
Dessication-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.872
KQM76885.1
Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.703
KQM76886.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.577
KQM74730.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.561
KQM66407.1
[Fe-S]-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.485
KQM77353.1
Peptidase M28; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.477
KQM67203.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.454
KQM69459.1
acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
  0.437
KQM78825.1
acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
  0.437
Your Current Organism:
Pedobacter sp. Leaf216
NCBI taxonomy Id: 1735684
Other names: P. sp. Leaf216
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