STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQN12175.1GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (258 aa)    
Predicted Functional Partners:
KQN12375.1
Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.
 
  
  0.824
KQN12174.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.787
KQN15456.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.777
KQN12176.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family.
       0.774
KQN12237.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.653
KQN11874.1
Autotransporter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.614
KQN12238.1
Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family.
  
     0.581
KQN09002.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  0.564
KQN12386.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.559
KQN09011.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.559
Your Current Organism:
Sphingomonas sp. Leaf28
NCBI taxonomy Id: 1735695
Other names: S. sp. Leaf28
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