Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACH52_0112Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family. (384 aa)    
Predicted Functional Partners:
ACH52_2074
Cobalamin B12-binding domain-containing protein.
 
    0.793
ACH52_2570
Hypothetical protein.
 
     0.779
ACH52_3297
Hypothetical protein.
 
     0.776
ACH52_0011
Hypothetical protein.
  
     0.762
ACH52_0111
Hypothetical protein.
       0.752
ACH52_0110
EamA-like transporter family protein.
  
    0.739
ACH52_0402
GntR family transcriptional regulator.
  
     0.737
ACH52_3538
GntR family transcriptional regulator.
  
     0.736
hemC
Hydroxymethylbilane synthase/uroporphyrinogen-III methyltransferase/synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
 
 0.694
ACH52_3669
GntR family transcriptional regulator.
  
     0.679
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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