Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACH52_0317Chemotaxis protein CheC. (203 aa)    
Predicted Functional Partners:
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
 0.999
ACH52_0312
Chemotaxis protein CheY.
 
 
 0.995
ACH52_0314
Chemotaxis protein CheD.
 
 
 0.989
ACH52_0320
Chemotaxis histidine kinase CheA.
 
 
 0.980
ACH52_0316
Chemotaxis protein CheY.
 
  
 0.973
ACH52_0311
Chemotaxis protein methylesterase CheB.
 
  
 0.969
ACH52_0315
Methyl-accepting chemotaxis protein.
 
 
 0.949
ACH52_0310
Chemotaxis protein methyltransferase CheR.
 
  
 0.916
ACH52_0321
Chemotaxis protein CheW.
  
  
 0.858
ACH52_0857
Inosine-5'-monophosphate dehydrogenase GuaB.
    
 
 0.846
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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