STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_0358Alpha/beta hydrolase. (270 aa)    
Predicted Functional Partners:
ACH52_2251
Fe hydrogenase HymB subunit.
  
 
 0.959
ACH52_3195
Iron-dependent hydrogenase subunit B HydB.
  
 
 0.941
ACH52_2250
Fe hydrogenase HymC subunit.
   
 
 0.710
ACH52_1166
NADH dehydrogenase subunit F.
  
 
 0.631
ACH52_2386
Acyl carrier protein AcpP.
  
 
 0.529
acpP
Acyl carrier protein AcpP; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.529
ACH52_0911
Thioredoxin-like ferredoxin.
   
   0.516
ACH52_1165
NADH dehydrogenase subunit E.
   
   0.516
ACH52_1504
Hypothetical protein.
   
   0.516
ACH52_2252
Fe hydrogenase HymA subunit.
   
   0.516
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.