STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_0380ANTAR domain-containing protein. (189 aa)    
Predicted Functional Partners:
ACH52_1815
Two component system histidine kinase.
  
 
 0.904
ACH52_2851
Branched-chain amino acid ABC transporter substrate-binding protein.
  
 
 0.904
ACH52_0378
Glutamate synthase (NADPH) GltB3 subunit.
 
  
 0.878
ACH52_0374
Glutamate synthase (NADPH) GltB1 subunit.
 
   
 0.875
ACH52_0375
Glutamate synthase (NADPH) GltB2 subunit; Belongs to the glutamate synthase family.
 
   
 0.839
ACH52_0377
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
 
  
 0.836
ACH52_0379
Glutamine synthetase type I GlnA.
 
  
 0.817
ACH52_0376
4Fe-4S double cluster binding domain-containing protein.
 
     0.761
ACH52_2284
Nitrogenase iron protein NifH; Belongs to the NifH/BchL/ChlL family.
  
  
 0.712
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase/ribosomal protein S1; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
 
    0.642
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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