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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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experimentally determined
co-expression
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gene co-occurrence
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trmBtRNA (guanine-N(7)-)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. (217 aa)    
Predicted Functional Partners:
truB
tRNA pseudouridine synthase TruB; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
 
 0.874
ACH52_2304
Aspartate/tyrosine/aromatic aminotransferase.
    0.817
ACH52_1145
16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
 
 
 0.816
ACH52_3504
NOL1/NOP2/sun family RNA methylase.
  
 
 0.749
ACH52_3849
N-acetylglucosamine-6-phosphate deacetylase NagA.
      0.702
truA
tRNA pseudouridine synthase A TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
  
 
 0.658
ACH52_1919
Zinc-binding domain-containing protein.
  
  
 0.648
ACH52_1178
seryl-tRNA synthetase SerS.
   
 
 0.634
rpmD
Ribosomal protein L30 RpmD.
   
  
 0.586
trmD
tRNA (guanine(37)-N(1))-methyltransferase TrmD; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.
      
 0.586
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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