Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACH52_0489Hypothetical protein. (313 aa)    
Predicted Functional Partners:
ACH52_0484
Propanediol utilization flavoprotein.
 
     0.848
ACH52_0487
Propionaldehyde dehydrogenase PduP.
 
     0.840
ACH52_0486
ATP:cob(I)alamin adenosyltransferase PduO; Belongs to the Cob(I)alamin adenosyltransferase family.
 
     0.769
ACH52_0488
Propanediol utilization protein PduS.
       0.697
ACH52_0475
Microcompartment protein PduB.
 
     0.684
ACH52_0490
Microcompartment protein PduT.
 
     0.635
ACH52_0480
Propanediol dehydratase reactivase beta subunit PduH.
 
     0.621
ACH52_0483
Propanediol utilization protein.
 
     0.593
PduE
Propanediol dehydratase small subunit PduE.
 
     0.559
ACH52_0479
Propanediol dehydratase reactivase alpha subunit PduG.
 
     0.552
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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