Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ACH52_0591Hypothetical protein. (324 aa)    
Predicted Functional Partners:
ACH52_0592
PadR family transcriptional regulator.
 
     0.953
ACH52_2225
Non-ribosomal peptide synthetase.
  
 
 0.832
ACH52_1195
Peptidyl-prolyl cis-trans isomerase cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
  
 
 0.779
ACH52_1037
Glycosyl transferase GT2 family.
  
 
 0.698
ACH52_0093
Hypothetical protein.
   
 
 0.692
ACH52_0227
Serine/threonine protein phosphatase.
  
   0.611
ACH52_1147
Serine/threonine protein phosphatase.
  
   0.611
ACH52_2164
Serine/threonine protein phosphatase.
  
   0.611
ACH52_3173
PadR family transcriptional regulator.
 
     0.602
ACH52_2011
MIP family channel protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 
 0.560
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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