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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_0761Short-chain dehydrogenase family protein. (252 aa)    
Predicted Functional Partners:
ACH52_2378
Malonyl CoA-acyl carrier protein transacylase FabD.
 
 0.725
ACH52_2376
Beta-ketoacyl-acyl-carrier-protein synthase II FabF; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 0.684
ACH52_1168
NADH dehydrogenase subunit G.
  
 
 0.681
ACH52_0569
Short-chain dehydrogenase family protein.
 
 
 0.648
ACH52_0805
1-phosphofructokinase PfkB; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.600
ACH52_2185
PTS system galactitol-specific IIC component.
  
    0.566
ACH52_1195
Peptidyl-prolyl cis-trans isomerase cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.551
ACH52_2456
acyl-CoA dehydrogenase.
  
 0.518
def
Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
     
 0.512
ACH52_3205
Metallophosphoesterase.
  
 
 0.482
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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