STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_0913SpoIIE domain-containing protein. (390 aa)    
Predicted Functional Partners:
ACH52_0911
Thioredoxin-like ferredoxin.
 
    0.960
ACH52_0912
Iron hydrogenase.
 
     0.959
ACH52_3202
Histidine kinase.
 
 
 0.773
ACH52_0384
Two component system histidine kinase/response regulator hybrid protein.
  
  
 0.770
ACH52_1097
FeFe hydrogenase H-cluster radical SAM maturase HydG.
  
  
 0.668
ACH52_0260
Anti-sigma F factor antagonist.
  
 
 0.666
ACH52_2223
Anti-sigma F factor antagonist.
  
 
 0.666
ACH52_3235
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.666
ACH52_3196
Iron-dependent hydrogenase subunit D HydD.
 
     0.627
ACH52_3042
GGDEF/EAL domain-containing protein.
  
  
 0.615
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.