STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_0932Cell surface protein. (1489 aa)    
Predicted Functional Partners:
ACH52_1195
Peptidyl-prolyl cis-trans isomerase cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
 0.562
ACH52_0933
Cell surface protein with subtilisin family serine protease domain protein.
   
 
0.544
ACH52_3785
Serpin; Belongs to the serpin family.
   
 0.536
ACH52_0928
Signal transduction protein with C-terminal ATPase domain protein.
 
     0.527
ACH52_1872
2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family.
   
 
 0.519
ACH52_0934
Cell surface protein with papain family cysteine protease domain protein.
 
    
0.506
ACH52_0929
Hypothetical protein.
       0.473
ACH52_0930
Cell surface protein.
       0.473
ACH52_0931
LytTr family DNA-binding response regulator.
       0.473
ACH52_3030
Cell surface protein.
 
     0.472
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.