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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pfkA6-phosphofructokinase PfkA; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (318 aa)    
Predicted Functional Partners:
ACH52_1002
Pyruvate kinase Pyk; Belongs to the pyruvate kinase family.
 
 0.999
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.992
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
  
 
 0.946
ACH52_3271
Fructose-1,6-bisphosphate aldolase class II Fba.
 
 
 0.943
ACH52_0605
Fructose-1,6-bisphosphate aldolase class II Fba.
 
 
 0.938
ACH52_0805
1-phosphofructokinase PfkB; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.938
ACH52_2788
Fructose-1,6-bisphosphate aldolase class I.
  
 0.938
eno
Phosphopyruvate hydratase Eno; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
  
 0.934
ACH52_1103
Fructose-1,6-bisphosphate aldolase class II Fba.
  
 
 0.929
ACH52_2653
Fructose-1,6-bisphosphate aldolase class II Fba.
  
 
 0.929
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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