Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACH52_1031Glycosyl transferase GT4 family. (365 aa)    
Predicted Functional Partners:
ACH52_1029
Bacterial sugar transferase.
  
  
 0.822
ACH52_1030
Glycosyl transferase GT4 family.
       0.773
ACH52_1033
Polysaccharide biosynthesis protein.
       0.752
ACH52_1034
Polysaccharide pyruvyl transferase.
 
  
 0.717
ACH52_1475
NAD dependent epimerase/dehydratase.
  
  
 0.562
ACH52_0677
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
  
 0.524
ACH52_0665
Glucose-1-phosphate thymidylyltransferase RfbA; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
 0.521
ACH52_0439
Nucleotide sugar dehydrogenase.
 
  
 0.493
ACH52_1478
Nucleotide sugar dehydrogenase.
 
  
 0.491
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.481
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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