Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACH52_1034Polysaccharide pyruvyl transferase. (403 aa)    
Predicted Functional Partners:
ACH52_1039
Coenzyme F420 hydrogenase beta subunit domain-containing protein.
     0.980
ACH52_1030
Glycosyl transferase GT4 family.
 
  
 0.722
ACH52_1031
Glycosyl transferase GT4 family.
 
  
 0.717
ACH52_1029
Bacterial sugar transferase.
  
  
 0.687
ACH52_1033
Polysaccharide biosynthesis protein.
  
  
 0.687
ACH52_2093
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase MenD.
    0.438
argB
Acetylglutamate kinase ArgB; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
      
 0.414
ACH52_1662
Hypothetical protein.
  
     0.402
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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