Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACH52_1571Trimethylamine methyltransferase family protein. (478 aa)    
Predicted Functional Partners:
ACH52_3135
Cobalamin B12-binding domain-containing protein.
   
  0.821
ACH52_1572
Trimethylamine methyltransferase family protein.
 
    
0.793
ACH52_1573
MFS transporter.
       0.694
ACH52_0116
Cobalamin B12-binding domain-containing protein.
   
  0.687
ACH52_3034
Cobalamin B12-binding domain-containing protein.
   
  0.687
ACH52_2073
Methanol:corrinoid methyltransferase.
     
  0.650
ACH52_0289
Methylamine methyltransferase corrinoid protein reductive activase.
 
     0.627
ACH52_1574
BCCT family transporter; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.545
ACH52_2067
Methylamine methyltransferase corrinoid protein reductive activase.
 
     0.522
ACH52_1568
Cobalamin B12-binding domain-containing protein.
   
   0.500
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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