Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACH52_1815Two component system histidine kinase. (643 aa)    
Predicted Functional Partners:
ACH52_2849
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.832
ACH52_2850
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.794
ACH52_0380
ANTAR domain-containing protein.
  
 
 0.754
ACH52_3771
Two component system histidine kinase.
 
   
 0.740
ACH52_1840
Two component system histidine kinase.
   
 0.738
ACH52_2548
Two component system histidine kinase.
  
     0.719
ACH52_1672
Two component system histidine kinase.
 
   
 0.707
ACH52_2372
Two component system response regulator.
  
  
 0.700
ACH52_1812
Two component system response regulator.
 
     0.663
ACH52_2731
Two component system histidine kinase.
   
 0.662
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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