Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACH52_1186 | ACH52_2019 | ACH52_1186 | ACH52_2019 | ATPase AAA family. | FtsK/SpoIIIE family protein. | 0.670 |
ACH52_1510 | ACH52_2019 | ACH52_1510 | ACH52_2019 | Cell division protein FtsI. | FtsK/SpoIIIE family protein. | 0.618 |
ACH52_2017 | ACH52_2019 | ACH52_2017 | ACH52_2019 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | FtsK/SpoIIIE family protein. | 0.802 |
ACH52_2017 | dut | ACH52_2017 | ACH52_2020 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | dUTP diphosphatase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.619 |
ACH52_2017 | pnp | ACH52_2017 | ACH52_2021 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Polyribonucleotide nucleotidyltransferase Pnp; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.651 |
ACH52_2017 | rimO | ACH52_2017 | ACH52_2018 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Radical SAM methylthiotransferase MiaB/RimO family; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.818 |
ACH52_2019 | ACH52_1186 | ACH52_2019 | ACH52_1186 | FtsK/SpoIIIE family protein. | ATPase AAA family. | 0.670 |
ACH52_2019 | ACH52_1510 | ACH52_2019 | ACH52_1510 | FtsK/SpoIIIE family protein. | Cell division protein FtsI. | 0.618 |
ACH52_2019 | ACH52_2017 | ACH52_2019 | ACH52_2017 | FtsK/SpoIIIE family protein. | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.802 |
ACH52_2019 | ACH52_3903 | ACH52_2019 | ACH52_3903 | FtsK/SpoIIIE family protein. | Nucleoid occlusion protein Noc; Belongs to the ParB family. | 0.762 |
ACH52_2019 | ACH52_3905 | ACH52_2019 | ACH52_3905 | FtsK/SpoIIIE family protein. | Chromosome partitioning protein ParB; Belongs to the ParB family. | 0.724 |
ACH52_2019 | dut | ACH52_2019 | ACH52_2020 | FtsK/SpoIIIE family protein. | dUTP diphosphatase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family. | 0.619 |
ACH52_2019 | pnp | ACH52_2019 | ACH52_2021 | FtsK/SpoIIIE family protein. | Polyribonucleotide nucleotidyltransferase Pnp; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.759 |
ACH52_2019 | rimO | ACH52_2019 | ACH52_2018 | FtsK/SpoIIIE family protein. | Radical SAM methylthiotransferase MiaB/RimO family; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.806 |
ACH52_2019 | rnj | ACH52_2019 | ACH52_0780 | FtsK/SpoIIIE family protein. | RNA-metabolising metallo-beta-lactamase family protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.685 |
ACH52_2019 | rpoC | ACH52_2019 | ACH52_0395 | FtsK/SpoIIIE family protein. | DNA-directed RNA polymerase beta' subunit RpoC; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.638 |
ACH52_3903 | ACH52_2019 | ACH52_3903 | ACH52_2019 | Nucleoid occlusion protein Noc; Belongs to the ParB family. | FtsK/SpoIIIE family protein. | 0.762 |
ACH52_3903 | ACH52_3905 | ACH52_3903 | ACH52_3905 | Nucleoid occlusion protein Noc; Belongs to the ParB family. | Chromosome partitioning protein ParB; Belongs to the ParB family. | 0.878 |
ACH52_3905 | ACH52_2019 | ACH52_3905 | ACH52_2019 | Chromosome partitioning protein ParB; Belongs to the ParB family. | FtsK/SpoIIIE family protein. | 0.724 |
ACH52_3905 | ACH52_3903 | ACH52_3905 | ACH52_3903 | Chromosome partitioning protein ParB; Belongs to the ParB family. | Nucleoid occlusion protein Noc; Belongs to the ParB family. | 0.878 |
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