STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_2125GntR family transcriptional regulator. (249 aa)    
Predicted Functional Partners:
ACH52_0465
GntR family transcriptional regulator.
  
     0.774
ACH52_1224
GntR family transcriptional regulator.
  
     0.770
ACH52_3669
GntR family transcriptional regulator.
  
     0.761
ACH52_2409
GntR family transcriptional regulator.
  
    0.685
ACH52_0114
GntR family transcriptional regulator.
  
     0.661
ACH52_3132
GntR family transcriptional regulator.
  
     0.655
ACH52_2114
GntR family transcriptional regulator.
  
    0.653
ACH52_3032
GntR family transcriptional regulator.
  
     0.646
ACH52_3668
GntR family transcriptional regulator.
  
     0.644
ACH52_1225
GntR family transcriptional regulator.
  
     0.608
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.