STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_2177Sortase family protein. (273 aa)    
Predicted Functional Partners:
ACH52_2178
LPXTG motif-containing cell surface protein.
 
   
 0.924
ACH52_2286
Sortase SrtB family.
     
 0.859
ACH52_2323
Sortase SrtB family.
     
 0.859
hppA
V-type H(+)-translocating pyrophosphatase; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.
      
 0.826
ACH52_3407
LPXTG-motif/CnaB domain-containing cell surface protein.
 
   
 0.792
ACH52_2180
CnaB domain-containing cell surface protein.
 
   
 0.727
ACH52_2176
Hypothetical protein.
       0.658
ACH52_3408
LPXTG-motif/CnaB domain-containing protein.
 
   
 0.478
ACH52_2790
5'-nucleotidase/metallophosphoesterase domain-containing protein; Belongs to the 5'-nucleotidase family.
  
  
 0.463
ACH52_0628
Cell surface protein.
 
   
 0.452
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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