Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
ACH52_2182 | ACH52_2183 | Hypothetical protein. | HAD superfamily hydrolase. | 0.499 |
ACH52_2182 | ACH52_2184 | Hypothetical protein. | BtpA family protein. | 0.499 |
ACH52_2182 | ACH52_2185 | Hypothetical protein. | PTS system galactitol-specific IIC component. | 0.458 |
ACH52_2182 | ACH52_2186 | Hypothetical protein. | PTS system galactitol-specific IIB component. | 0.430 |
ACH52_2182 | ACH52_2187 | Hypothetical protein. | Glutamyl aminopeptidase M42 family. | 0.430 |
ACH52_2182 | ACH52_2188 | Hypothetical protein. | PTS system galactitol-specific IIA component. | 0.430 |
ACH52_2183 | ACH52_2182 | HAD superfamily hydrolase. | Hypothetical protein. | 0.499 |
ACH52_2183 | ACH52_2184 | HAD superfamily hydrolase. | BtpA family protein. | 0.777 |
ACH52_2183 | ACH52_2185 | HAD superfamily hydrolase. | PTS system galactitol-specific IIC component. | 0.701 |
ACH52_2183 | ACH52_2186 | HAD superfamily hydrolase. | PTS system galactitol-specific IIB component. | 0.652 |
ACH52_2183 | ACH52_2187 | HAD superfamily hydrolase. | Glutamyl aminopeptidase M42 family. | 0.654 |
ACH52_2183 | ACH52_2188 | HAD superfamily hydrolase. | PTS system galactitol-specific IIA component. | 0.654 |
ACH52_2183 | ACH52_2588 | HAD superfamily hydrolase. | L-ribulose-5-phosphate 4-epimerase AraD. | 0.511 |
ACH52_2183 | ACH52_3493 | HAD superfamily hydrolase. | Class II aldolase/adducin family protein. | 0.511 |
ACH52_2183 | ACH52_3494 | HAD superfamily hydrolase. | Class II aldolase/adducin family protein. | 0.511 |
ACH52_2183 | ACH52_3495 | HAD superfamily hydrolase. | Class II aldolase/adducin family protein. | 0.511 |
ACH52_2184 | ACH52_2182 | BtpA family protein. | Hypothetical protein. | 0.499 |
ACH52_2184 | ACH52_2183 | BtpA family protein. | HAD superfamily hydrolase. | 0.777 |
ACH52_2184 | ACH52_2185 | BtpA family protein. | PTS system galactitol-specific IIC component. | 0.907 |
ACH52_2184 | ACH52_2186 | BtpA family protein. | PTS system galactitol-specific IIB component. | 0.763 |
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