STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_22554Fe-4S double cluster binding domain-containing protein. (156 aa)    
Predicted Functional Partners:
ACH52_2254
Aldehyde ferredoxin oxidoreductase.
 
 
 0.975
ACH52_3195
Iron-dependent hydrogenase subunit B HydB.
  
 
 0.950
ACH52_1168
NADH dehydrogenase subunit G.
  
 
 0.949
ACH52_2250
Fe hydrogenase HymC subunit.
 
 
 0.928
ACH52_3194
Iron-dependent hydrogenase subunit A HydA.
  
 
 0.924
rnfB
Electron transport complex RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
  
 
 0.920
ACH52_2251
Fe hydrogenase HymB subunit.
  
 
 0.920
ACH52_0912
Iron hydrogenase.
   
 
 0.899
ACH52_3089
Formate dehydrogenase alpha subunit FdhA.
 
 
 0.879
ACH52_2450
Pyruvate:ferredoxin oxidoreductase.
  
 
 0.872
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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