Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_2256Hypothetical protein. (76 aa)    
Predicted Functional Partners:
ACH52_2254
Aldehyde ferredoxin oxidoreductase.
       0.678
ACH52_2255
4Fe-4S double cluster binding domain-containing protein.
       0.678
ACH52_2257
HTH domain-containing protein.
       0.527
ACH52_2258
HTH domain-containing protein.
       0.527
ACH52_2259
Hypothetical protein.
       0.527
ACH52_2253
MoaD family protein.
       0.508
ACH52_2250
Fe hydrogenase HymC subunit.
       0.484
ACH52_2251
Fe hydrogenase HymB subunit.
       0.484
ACH52_2252
Fe hydrogenase HymA subunit.
       0.484
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.