Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACH52_2284Nitrogenase iron protein NifH; Belongs to the NifH/BchL/ChlL family. (285 aa)    
Predicted Functional Partners:
ACH52_2283
Nitrogenase component 1 type oxidoreductase.
 
 
 0.993
hcp
Hydroxylamine reductase Hcp; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
  
  
 0.932
ACH52_0379
Glutamine synthetase type I GlnA.
   
 
 0.925
ACH52_0186
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.910
ACH52_3050
Glutamate/leucine/phenylalanine/valine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
     
 0.910
ACH52_0373
Glutamine synthetase type III.
     
  0.900
ACH52_1168
NADH dehydrogenase subunit G.
  
 
 0.877
ACH52_1606
Molybdate ABC transporter permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.841
ACH52_2282
Iron ABC transporter substrate-binding protein.
 
   
 0.792
ACH52_0380
ANTAR domain-containing protein.
  
  
 0.744
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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