rpmA protein (Eubacterium limosum) - STRING interaction network

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Score

rpmA

Ribosomal protein L27 RpmA; Belongs to the bacterial ribosomal protein bL27 family. (95 aa)

Predicted Functional Partners:

rplU

0.999

rplM

0.996

ACH52_2321

0.996

rpsP

0.996

rpsR

0.996

rpsI

0.995

rplS

0.995

rplC

0.994

rpsD

0.994

rplT

0.994

Your Current Organism:

Eubacterium limosum

NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACH52_2321	rplC	ACH52_2321	ACH52_0517	Hypothetical protein.	Ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.692
ACH52_2321	rplM	ACH52_2321	ACH52_0552	Hypothetical protein.	Ribosomal protein L13 RplM; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.457
ACH52_2321	rplS	ACH52_2321	ACH52_2667	Hypothetical protein.	Ribosomal protein L19 RplS; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.554
ACH52_2321	rplU	ACH52_2321	ACH52_2322	Hypothetical protein.	Ribosomal protein L21 RplU; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.988
ACH52_2321	rpmA	ACH52_2321	ACH52_2320	Hypothetical protein.	Ribosomal protein L27 RpmA; Belongs to the bacterial ribosomal protein bL27 family.	0.996
ACH52_2321	rpsD	ACH52_2321	ACH52_0545	Hypothetical protein.	Ribosomal protein S4 RpsD; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.628
ACH52_2321	rpsI	ACH52_2321	ACH52_0553	Hypothetical protein.	Ribosomal protein S9 RpsI; Belongs to the universal ribosomal protein uS9 family.	0.400
ACH52_2321	rpsR	ACH52_2321	ACH52_3896	Hypothetical protein.	Ribosomal protein S18 RpsR; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.512
rplC	ACH52_2321	ACH52_0517	ACH52_2321	Ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Hypothetical protein.	0.692
rplC	rplM	ACH52_0517	ACH52_0552	Ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L13 RplM; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplC	rplS	ACH52_0517	ACH52_2667	Ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L19 RplS; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.989
rplC	rplT	ACH52_0517	ACH52_1896	Ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L20 RplT; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.993
rplC	rplU	ACH52_0517	ACH52_2322	Ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L21 RplU; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.993
rplC	rpmA	ACH52_0517	ACH52_2320	Ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L27 RpmA; Belongs to the bacterial ribosomal protein bL27 family.	0.994
rplC	rpsD	ACH52_0517	ACH52_0545	Ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S4 RpsD; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.996
rplC	rpsI	ACH52_0517	ACH52_0553	Ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S9 RpsI; Belongs to the universal ribosomal protein uS9 family.	0.995
rplC	rpsP	ACH52_0517	ACH52_2673	Ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S16 RpsP; Belongs to the bacterial ribosomal protein bS16 family.	0.991
rplC	rpsR	ACH52_0517	ACH52_3896	Ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein S18 RpsR; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.992
rplM	ACH52_2321	ACH52_0552	ACH52_2321	Ribosomal protein L13 RplM; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Hypothetical protein.	0.457
rplM	rplC	ACH52_0552	ACH52_0517	Ribosomal protein L13 RplM; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L3 RplC; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.999

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