STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_2575Hypothetical protein. (97 aa)    
Predicted Functional Partners:
ACH52_0838
Pyruvate dehydrogenase complex E1 component beta subunit.
  
 0.983
ACH52_0837
Pyruvate dehydrogenase complex E1 component alpha subunit.
  
 0.936
ACH52_3488
Crotonase Crt; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.930
ACH52_0239
Electron transfer flavoprotein alpha subunit/acyl-CoA dehydrogenase.
  
 0.929
ACH52_3486
butyryl-CoA dehydrogenase Bcd.
  
 0.929
prs
Ribose-phosphate diphosphokinase Prs; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 0.921
ACH52_0184
4-hydroxybutyryl-CoA dehydratase.
     
  0.900
ACH52_0296
Dihydrolipoyl dehydrogenase LpdA.
  
 0.897
ACH52_0757
Dihydrolipoyl dehydrogenase LpdA.
  
 0.897
ACH52_0840
Pyruvate dehydrogenase complex dihydrolipoamide acyltransferase E3 component.
  
 0.897
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.