STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_2575Hypothetical protein. (97 aa)    
Predicted Functional Partners:
ACH52_0838
Pyruvate dehydrogenase complex E1 component beta subunit.
  
 0.995
ACH52_0837
Pyruvate dehydrogenase complex E1 component alpha subunit.
  
 0.981
prs
Ribose-phosphate diphosphokinase Prs; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
  
 0.946
ACH52_2302
Lipoate-protein ligase.
  
 0.927
ACH52_0296
Dihydrolipoyl dehydrogenase LpdA.
  
 0.907
ACH52_0757
Dihydrolipoyl dehydrogenase LpdA.
  
 0.907
ACH52_0840
Pyruvate dehydrogenase complex dihydrolipoamide acyltransferase E3 component.
  
 0.907
ACH52_2576
Hypothetical protein.
       0.785
ACH52_2574
Sel1 repeat domain-containing protein.
  
    0.781
ACH52_2251
Fe hydrogenase HymB subunit.
  
 
 0.777
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.