Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
ACH52_2829ABC transporter ATP-binding protein. (281 aa)    
Predicted Functional Partners:
ACH52_2827
ABC transporter permease protein.
 
 
  0.991
ACH52_2828
ABC transporter permease protein.
 
  
 0.956
ACH52_2830
TetR family transcriptional regulator.
 
     0.941
ACH52_0925
ABC transporter ATP-binding protein.
   
0.908
ACH52_3764
Sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.903
ACH52_1079
ABC transporter ATP-binding protein.
   
0.891
ecfA
Cobalt ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
   
0.767
ACH52_2826
Nitroreductase family protein.
  
    0.548
ACH52_0568
ABC transporter permease protein.
 
 
 0.533
ACH52_2825
TfoX domain-containing protein.
       0.527
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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