Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACH52_2847Branched-chain amino acid ABC transporter ATP-binding protein. (234 aa)    
Predicted Functional Partners:
ACH52_2849
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  0.999
ACH52_2850
Branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  0.998
ACH52_2851
Branched-chain amino acid ABC transporter substrate-binding protein.
 
 
  0.989
ACH52_2848
Branched-chain amino acid ABC transporter ATP-binding protein.
 
  
 
0.982
ACH52_0366
Hypothetical protein.
 
      0.874
ACH52_1673
ABC transporter permease protein.
  
 
 0.463
ACH52_0568
ABC transporter permease protein.
  
 
 0.437
tig
Trigger factor Tig; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
       0.420
ACH52_3775
ABC transporter ATP-binding protein.
 
     
0.416
ACH52_1703
ABC transporter ATP-binding protein.
 
     
0.415
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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