Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ACH52_2914Carbon-monoxide dehydrogenase catalytic subunit CdhA. (631 aa)    
Predicted Functional Partners:
ACH52_2912
CO dehydrogenase/acetyl-CoA synthase complex beta subunit CdhC.
 
 
 0.999
ACH52_2917
CO dehydrogenase/acetyl-CoA synthase complex delta subunit CdhD.
 
 0.997
ACH52_2916
CO dehydrogenase/acetyl-CoA synthase complex gamma subunit CdhE.
 
 
 0.996
ACH52_1168
NADH dehydrogenase subunit G.
  
 0.952
ACH52_2913
CO dehydrogenase/acetyl-CoA synthase complex accessory protein.
 
   
 0.948
ACH52_3797
FmdE family protein.
  
  
  0.944
ACH52_0376
4Fe-4S double cluster binding domain-containing protein.
    
 0.935
ACH52_2991
4Fe-4S binding domain-containing protein.
 
  
 0.925
ACH52_2915
CO dehydrogenase/acetyl-CoA synthase complex methyltransferase subunit.
 
   
 0.879
ACH52_2920
CO dehydrogenase/acetyl-CoA synthase complex accessory protein.
 
   
 0.843
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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