STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_2970Vitamin B12 dependent methionine synthase activation domain-containing protein. (217 aa)    
Predicted Functional Partners:
ACH52_2971
aminoacyl-tRNA editing domain-containing protein.
       0.718
ACH52_2972
EamA-like transporter family protein.
       0.718
ACH52_0295
5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 
 0.714
ACH52_2973
Sigma-54-dependent transcriptional regulator.
       0.607
ACH52_1639
MFS transporter.
 
     0.600
ACH52_0136
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase.
  
 
 0.571
ACH52_2276
Glycine cleavage system H protein.
    
 0.559
ACH52_0294
5,10-methylenetetrahydrofolate reductase.
    
 0.554
gcvH
Glycine cleavage system H protein GcvH; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
    
 0.540
ACH52_2967
Methyltransferase MtaA/CmuA family; Belongs to the uroporphyrinogen decarboxylase family.
 
   
 0.532
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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