Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
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Co-expression
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[Homology]
Score
ACH52_3133GntR family transcriptional regulator. (233 aa)    
Predicted Functional Partners:
ACH52_3132
GntR family transcriptional regulator.
 
    
0.836
ACH52_3135
Cobalamin B12-binding domain-containing protein.
       0.780
ACH52_3075
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.633
ACH52_3160
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.631
ACH52_3750
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.630
ACH52_2786
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.629
ACH52_3610
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.629
ACH52_0391
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
 
     0.628
ACH52_3612
Hypothetical protein; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.628
ACH52_0087
Hypothetical protein.
  
     0.627
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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