Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACH52_3177FAD-linked oxidase. (478 aa)    
Predicted Functional Partners:
ACH52_2111
Electron transfer flavoprotein alpha subunit.
 
 0.981
ACH52_2112
Electron transfer flavoprotein beta subunit.
 
 0.973
ACH52_3176
Electron transfer flavoprotein beta subunit.
 
 
 0.932
ACH52_2935
Hypothetical protein.
 
  
  0.931
ACH52_2110
Lactate dehydrogenase.
  
  
 
0.930
ACH52_2450
Pyruvate:ferredoxin oxidoreductase.
   
 0.926
ACH52_1002
Pyruvate kinase Pyk; Belongs to the pyruvate kinase family.
   
 0.917
ACH52_1125
D-isomer specific 2-hydroxyacid dehydrogenase.
   
 0.914
ACH52_2293
Pyruvate phosphate dikinase PpdK; Belongs to the PEP-utilizing enzyme family.
    
 0.914
ACH52_2328
NAD-dependent malic enzyme.
  
 
 0.911
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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