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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_3322Hypothetical protein. (589 aa)    
Predicted Functional Partners:
ACH52_3323
HAD superfamily hydrolase.
     
 0.707
ACH52_0897
Phosphoribosylformylglycinamidine synthase.
  
  
 0.647
AspA
Aspartate ammonia-lyase AspA.
  
  
 0.578
ACH52_0839
Pyruvate dehydrogenase complex dihydrolipoamide acyltransferase E2 component.
   
  
 0.559
ACH52_2575
Hypothetical protein.
   
  
 0.559
ACH52_3320
Hypothetical protein.
 
     0.553
ACH52_3347
Glyceraldehyde-3-phosphate dehydrogenase Gap; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.534
ACH52_0487
Propionaldehyde dehydrogenase PduP.
  
  
 0.529
ACH52_2449
Aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
  
  
 0.529
ACH52_3321
Rubrerythrin Rbr.
     
 0.481
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.