STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_3418FeS assembly protein SufBD. (311 aa)    
Predicted Functional Partners:
ACH52_3417
FeS assembly ATPase SufC.
 
 
 0.999
ACH52_0770
FeS cluster assembly scaffold protein NifU.
  
  
 0.895
ACH52_3416
HAD superfamily hydrolase.
       0.780
ACH52_3290
NifU-like N terminal domain-containing protein.
  
  
 0.769
ACH52_1267
Cysteine desulfurase family protein.
  
 
 0.749
ACH52_1598
Selenium-dependent molybdenum hydroxylase system protein YqeB family.
  
 
 0.749
ACH52_1599
Cysteine desulfurase family protein.
  
 
 0.749
proA
Gamma-glutamyl phosphate reductase ProA; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
       0.574
ACH52_0857
Inosine-5'-monophosphate dehydrogenase GuaB.
   
 
 0.539
ACH52_3419
EamA-like transporter family protein.
       0.460
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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