STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_3489Thiolase ThiA; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)    
Predicted Functional Partners:
ACH52_3487
3-hydroxybutyryl-CoA dehydrogenase Hbd.
 0.999
ACH52_3488
Crotonase Crt; Belongs to the enoyl-CoA hydratase/isomerase family.
 0.999
ACH52_3486
butyryl-CoA dehydrogenase Bcd.
 
 0.996
ACH52_0239
Electron transfer flavoprotein alpha subunit/acyl-CoA dehydrogenase.
 
 0.994
ACH52_2456
acyl-CoA dehydrogenase.
 
 0.983
ACH52_2450
Pyruvate:ferredoxin oxidoreductase.
  
 
 0.955
ACH52_1872
2-methylcitrate synthase/citrate synthase II; Belongs to the citrate synthase family.
  
 0.951
ACH52_2384
acetyl-CoA carboxylase biotin carboxylase subunit AccC; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.940
leuA
2-isopropylmalate synthase LeuA; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
  
 
 0.937
ACH52_1315
2-isopropylmalate synthase LeuA; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 
 0.937
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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