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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACH52_3596Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (303 aa)    
Predicted Functional Partners:
ACH52_3597
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
  
 0.997
ACH52_3595
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein.
  
0.989
ACH52_0920
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
  
 0.987
ACH52_1464
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
  
 0.987
ACH52_3724
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
  
 0.986
ACH52_3792
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
  
 0.986
ACH52_3598
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
 
 0.971
ACH52_1244
ABC transporter ATP-binding protein.
 
   
0.913
ACH52_3814
ABC transporter ATP-binding protein.
 
    
0.910
ACH52_1690
2-aminoethylphosphonate ABC transporter ATP-binding protein.
 
   
0.909
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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