Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ACH52_3789Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (297 aa)    
Predicted Functional Partners:
ACH52_3792
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
 
 0.995
ACH52_0920
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
 
 0.991
ACH52_1464
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
 
 0.991
ACH52_3597
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
 
 0.991
ACH52_3724
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
 
 0.991
ACH52_3793
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
 
 
 0.956
ACH52_0919
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
 
 0.930
ACH52_3790
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
0.927
ACH52_1463
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
 
 0.924
ACH52_3598
Dipeptide/oligopeptide/nickel ABC transporter permease protein.
 
 0.924
Your Current Organism:
Eubacterium limosum
NCBI taxonomy Id: 1736
Other names: ATCC 8486, Bacteroides limosus, Butyribacterium limosum, Butyribacterium rettgeri, CCUG 16793, CIP 104169, DSM 20543, E. limosum, JCM 6421, JCM 9978, Mycobacterium limosum
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