KQN19388.1 protein (Sphingomonas sp. Leaf33)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

KQN19388.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (714 aa)

Predicted Functional Partners:

KQN19385.1

0.991

KQN19386.1

0.991

KQN19389.1

0.963

KQN19383.1

0.945

KQN19384.1

0.933

KQN19380.1

0.919

KQN19377.1

0.907

KQN19613.1

0.906

KQN19387.1

0.824

KQN19376.1

0.812

Your Current Organism:

Sphingomonas sp. Leaf33

NCBI taxonomy Id: 1736215
Other names: S. sp. Leaf33

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KQN19376.1	KQN19377.1	ASE86_12865	ASE86_12870	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
KQN19376.1	KQN19380.1	ASE86_12865	ASE86_12885	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876
KQN19376.1	KQN19383.1	ASE86_12865	ASE86_12905	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850
KQN19376.1	KQN19384.1	ASE86_12865	ASE86_12915	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tail tape measure protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.523
KQN19376.1	KQN19385.1	ASE86_12865	ASE86_12920	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
KQN19376.1	KQN19386.1	ASE86_12865	ASE86_12925	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.832
KQN19376.1	KQN19388.1	ASE86_12865	ASE86_12935	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.812
KQN19376.1	KQN19389.1	ASE86_12865	ASE86_12940	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.801
KQN19376.1	KQN19613.1	ASE86_12865	ASE86_12890	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.730
KQN19377.1	KQN19376.1	ASE86_12870	ASE86_12865	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.910
KQN19377.1	KQN19380.1	ASE86_12870	ASE86_12885	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.984
KQN19377.1	KQN19383.1	ASE86_12870	ASE86_12905	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.972
KQN19377.1	KQN19384.1	ASE86_12870	ASE86_12915	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Tail tape measure protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.673
KQN19377.1	KQN19385.1	ASE86_12870	ASE86_12920	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.958
KQN19377.1	KQN19386.1	ASE86_12870	ASE86_12925	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.963
KQN19377.1	KQN19387.1	ASE86_12870	ASE86_12930	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.431
KQN19377.1	KQN19388.1	ASE86_12870	ASE86_12935	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.907
KQN19377.1	KQN19389.1	ASE86_12870	ASE86_12940	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.829
KQN19377.1	KQN19613.1	ASE86_12870	ASE86_12890	Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.981
KQN19380.1	KQN19376.1	ASE86_12885	ASE86_12865	Phage capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.876