STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQN39012.1Arabinosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family. (308 aa)    
Predicted Functional Partners:
KQN39011.1
Six-hairpin glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.933
KQN39014.1
Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.889
KQN39013.1
Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.853
KQN39004.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.805
KQN39016.1
Polysaccharide lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.788
KQN39015.1
Polysaccharide lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.773
KQN39140.1
Acetyl xylan esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.709
KQN38957.1
Rhamnogalacturonan acetylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.707
KQN39136.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.704
KQN39029.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.703
Your Current Organism:
Pedobacter sp. Leaf41
NCBI taxonomy Id: 1736218
Other names: P. sp. Leaf41
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.