STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQN47545.1Rod shape-determining protein RodA; Derived by automated computational analysis using gene prediction method: Protein Homology. (370 aa)    
Predicted Functional Partners:
KQN47546.1
Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
KQN44202.1
Penicillin-binding protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.991
KQN49392.1
Cell division protein FtsI; Penicillin-binding protein 3; transpeptidase involved in septal peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.977
KQN46959.1
Peptidoglycan synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.975
KQN47544.1
Septal ring protein, suppressor of prc, minor lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.970
KQN49400.1
Cell division protein FtsQ; Involved in septum formation; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.943
murG
N-acetylglucosaminyl transferase; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.917
KQN49538.1
UDP-N-acetylmuramate--alanine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.894
murD
UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.872
mrcA
Penicillin-binding protein 1A; Bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.870
Your Current Organism:
Serratia sp. Leaf50
NCBI taxonomy Id: 1736223
Other names: S. sp. Leaf50
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