STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rihBRibonucleoside hydrolase; Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)    
Predicted Functional Partners:
KQN51273.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.778
KQN44375.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.773
KQN46338.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.770
KQN48083.1
Ribokinase; Catalyzes the formation of D-ribose 5-phosphate from ribose; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.768
KQN49835.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.762
lacZ
beta-D-galactosidase; Forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.757
KQN44362.1
Beta-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.724
KQN47884.1
Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.696
KQN42967.1
Transcriptional regulator; Activator of nucleoside metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.692
KQN52056.1
Nicotinamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.676
Your Current Organism:
Serratia sp. Leaf50
NCBI taxonomy Id: 1736223
Other names: S. sp. Leaf50
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.