STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQQ89320.1Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology. (388 aa)    
Predicted Functional Partners:
KQQ97560.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.912
KQQ97656.1
Metal-dependent phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.896
KQQ97107.1
Oxygen sensor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.895
KQQ97345.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.876
KQQ92056.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.876
KQQ88982.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.876
KQQ87317.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.872
KQQ87146.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.864
KQQ87323.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.860
KQQ86458.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.856
Your Current Organism:
Massilia sp. Leaf139
NCBI taxonomy Id: 1736272
Other names: M. sp. Leaf139
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.